Basic Information
Locus ID:
BH05.4244
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 48603361 | 48603894 | - | BH05.4244 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 18,337.35 Da | 31.86 | 62.43 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 27 | 177 | 3.08418E-80 | - |
| Pfam | PF00314 | Thaumatin family | 31 | 136 | 6.2E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 24 | 177 | 2.75E-59 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 24 | 145 | 6.2E-49 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 146 | 177 | 1.3E-6 | IPR037176 |
| SMART | SM00205 | tha2 | 27 | 177 | 7.0E-53 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 143 | 177 | 8.0E-4 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 149 | 8.0E-48 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 24 | 177 | 36.877792 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 81 | 110 | 4.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 167 | 176 | 4.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 118 | 134 | 4.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 46 | 55 | 4.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 26 | 38 | 4.2E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 68 | 79 | 4.2E-45 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 1.04E-44 |
| RefSeq | XP_025808117.1 | thaumatin-like protein [Panicum hallii] | 1.75E-116 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 1.74E-93 | |
| TrEMBL | A0A3L6T3X6 | Thaumatin-like protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G00840 PE=4 SV=1 | 9.73E-116 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology