Basic Information
Locus ID:
BH05.4243
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 48590056 | 48590556 | + | BH05.4243 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.51 | 17,040.83 Da | 31.47 | 73.01 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 30 | 127 | 6.5E-26 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 129 | 1.83E-34 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 23 | 157 | 3.1E-34 | IPR037176 |
| SMART | SM00205 | tha2 | 26 | 146 | 6.2E-14 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 23 | 166 | 21.612015 | IPR001938 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 80 | 95 | - | IPR017949 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 80 | 109 | 5.5E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 67 | 78 | 5.5E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 114 | 130 | 5.5E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 45 | 54 | 5.5E-27 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 25 | 37 | 5.5E-27 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73620.1 | Pathogenesis-related thaumatin superfamily protein. | 9.52E-26 |
| RefSeq | XP_025808117.1 | thaumatin-like protein [Panicum hallii] | 5.23E-50 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 3.27E-48 | |
| TrEMBL | A0A1E5UTR7 | Thaumatin-like protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0022729 PE=4 SV=1 | 8.15E-58 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology