Basic Information
Locus ID:
BH05.4241
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 48566562 | 48567089 | + | BH05.4241 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 17,776.88 Da | 30.67 | 69.31 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 27 | 175 | 8.44377E-75 | - |
| Pfam | PF00314 | Thaumatin family | 31 | 136 | 1.2E-31 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 24 | 175 | 7.46E-54 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 25 | 175 | 4.2E-52 | IPR037176 |
| SMART | SM00205 | tha2 | 27 | 175 | 6.5E-42 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 153 | 5.4E-45 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 145 | 175 | 0.062 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 24 | 175 | 34.228775 | IPR001938 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 82 | 97 | - | IPR017949 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 165 | 174 | 3.5E-37 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 46 | 55 | 3.5E-37 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 82 | 111 | 3.5E-37 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 117 | 133 | 3.5E-37 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 26 | 38 | 3.5E-37 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 2.42E-36 |
| RefSeq | XP_010234031.1 | thaumatin-like pathogenesis-related protein 1 [Brachypodium distachyon] | 1.32E-87 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 4.94E-81 | |
| TrEMBL | A0A5J9WLP6 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00167 PE=4 SV=1 | 5.49E-88 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology