Basic Information
Locus ID:
BH05.4030
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 46172184 | 46177060 | + | BH05.4030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 55,177.13 Da | 37.32 | 92.57 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 28 | 318 | 8.3E-67 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 322 | 1.89E-93 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 336 | 411 | 6.41E-11 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 326 | 444 | 7.7E-10 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 115 | 325 | 3.9E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 24 | 114 | 4.4E-30 | - |
| SMART | SM00220 | serkin_6 | 28 | 318 | 5.5E-92 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 28 | 318 | 45.587109 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 34 | 57 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 155 | 167 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20930.1 | cyclin-dependent kinase B2;2. Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. | 1.58E-173 |
| RefSeq | XP_025821922.1 | cyclin-dependent kinase B2-1 [Panicum hallii] | 1.89E-228 |
| Q0J4I1 | Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB2-1 PE=1 SV=1 | 5.63E-204 | |
| TrEMBL | A0A1E5VCP0 | Cyclin-dependent kinase B2-1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016054 PE=3 SV=1 | 2.68E-228 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology