Basic Information
Locus ID:
BH05.3968
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
SnRK2.3
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 45499587 | 45503345 | - | BH05.3968 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.41 | 60,075.57 Da | 67.52 | 78.30 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 34 | 286 | 1.6E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 362 | 1.26E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 291 | 9.2E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 17 | 109 | 2.7E-30 | - |
| SMART | SM00220 | serkin_6 | 34 | 290 | 9.7E-80 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 293 | 43.099525 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 40 | 63 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 363 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66880.1 | sucrose nonfermenting 1(SNF1)-related protein kinase 2.3. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth. | 5.65E-140 |
| RefSeq | XP_002866727.1 | serine/threonine-protein kinase SRK2I [Arabidopsis lyrata subsp. lyrata] | 9.34E-138 |
| Q39193 | Serine/threonine-protein kinase SRK2I OS=Arabidopsis thaliana OX=3702 GN=SRK2I PE=1 SV=1 | 5.43E-139 | |
| TrEMBL | J3NEK5 | Protein kinase domain-containing protein OS=Oryza brachyantha OX=4533 GN=102710831 PE=3 SV=1 | 5.44E-137 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for BH05.3968.