HalophFGD

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Basic Information
Locus ID: BH05.3927
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
BH05 44874668 44875027 + BH05.3927
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
11.24 13,747.90 Da 80.42 89.41 -0.24
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 34 70 4.3E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 28 104 9.68E-13 IPR036047
Gene3D G3DSA:1.20.1280.50 - 30 76 1.1E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051186783.1 uncharacterized protein LOC127300671 [Lolium perenne] 9.47E-14
TrEMBL A0A835KN72 F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_010815 PE=4 SV=1 7.43E-23
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH05.3855, AH05.3915, BH05.3927, CH05.4131, CH05.4136
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_4BG0348850, gene-QOZ80_5AG0395480 ...
gene-QOZ80_5BG0443800
Poaceae Paspalum vaginatum 3 gene-BS78_08G118600, gene-BS78_08G119600 ...
gene-BS78_08G145600
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.