Basic Information
Locus ID:
BH05.3914
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 44703044 | 44705274 | - | BH05.3914 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.25 | 46,317.58 Da | 51.92 | 70.57 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 24 | 52 | 1.8E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 72 | 1.03E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 75 | 4.4E-8 | - |
| SMART | SM00256 | fbox_2 | 23 | 64 | 0.0027 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 146 | 364 | 7.7E-13 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 412 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039841203.1 | F-box/LRR-repeat/kelch-repeat protein At1g09650-like [Panicum virgatum] | 1.45E-144 |
| TrEMBL | A0A3L6T3S6 | Putative F-box protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G03590 PE=4 SV=1 | 1.75E-143 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology