Basic Information
Locus ID:
BH05.3792
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 43410514 | 43417924 | + | BH05.3792 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 81,988.25 Da | 54.75 | 74.62 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 472 | 718 | 7.71131E-133 | - |
| CDD | cd00130 | PAS | 121 | 222 | 1.46866E-15 | IPR000014 |
| Pfam | PF00989 | PAS fold | 113 | 220 | 4.3E-16 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 467 | 718 | 1.9E-68 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 117 | 219 | 5.23E-20 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 436 | 718 | 1.48E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 123 | 228 | 7.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 544 | 738 | 8.4E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 459 | 543 | 3.7E-30 | - |
| SMART | SM00220 | serkin_6 | 466 | 726 | 8.8E-59 | IPR000719 |
| SMART | SM00091 | pas_2 | 112 | 179 | 1.6E-11 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 111 | 222 | 2.3E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 466 | 727 | 44.866276 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 110 | 181 | 18.988047 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 585 | 597 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 540 | 553 | 1.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 689 | 711 | 1.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 645 | 667 | 1.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 579 | 597 | 1.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 626 | 636 | 1.0E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 339 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
| Coils | Coil | Coil | 711 | 735 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67890.1 | PAS domain-containing protein tyrosine kinase family protein. | 2.07E-262 |
| RefSeq | XP_004962762.1 | probable serine/threonine-protein kinase SIS8 isoform X2 [Setaria italica] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 2.27E-106 | |
| TrEMBL | K3Z429 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101767428 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology