HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: BH05.3727
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
Chromosome Start End Strand ID
BH05 42543891 42546525 - BH05.3727
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.29 42,176.38 Da 63.64 63.02 -0.29
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 154 176 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 37 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT1G10240.1 FAR1-related sequence 11. 1.34E-23
RefSeq XP_002446529.1 protein FAR1-RELATED SEQUENCE 11 [Sorghum bicolor] 2.15E-31
Swiss-Prot Q9SY66 Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana OX=3702 GN=FRS11 PE=1 SV=1 1.33E-22
TrEMBL A0A811QX17 Protein FAR1-RELATED SEQUENCE OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS44219 PE=3 SV=1 8.96E-32
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 28 AH02.1637, AH02.3407, AH04.1021, AH04.1940, AH06.1327 ...
AH06.1908, AH06.2307, AH08.1711, AH08.795, BH02.2325, BH04.1838, BH04.2023, BH04.2346, BH04.82, BH05.2507, BH05.3727, BH09.185, BH09.477, BH09.479, CH02.1733, CH03.4794, CH04.1028, CH04.1436, CH04.44, CH05.3459, CH06.1596, CH09.2360, CH09.521
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.