Basic Information
Locus ID:
BH05.3583
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 40727883 | 40733740 | + | BH05.3583 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 51,475.02 Da | 52.41 | 53.33 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 379 | 436 | 1.8E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 222 | 278 | 9.0E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 370 | 438 | 2.75E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 220 | 280 | 3.53E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 207 | 281 | 1.4E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 363 | 439 | 2.3E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 221 | 279 | 7.2E-34 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 378 | 437 | 7.0E-40 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 222 | 280 | 23.226875 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 373 | 438 | 37.412945 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 470 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 4.71E-110 |
| RefSeq | XP_039839520.1 | probable WRKY transcription factor 3 [Panicum virgatum] | 8.76E-296 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 4.55E-109 | |
| TrEMBL | A0A1E5W542 | Putative WRKY transcription factor 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006448 PE=4 SV=1 | 2.29E-304 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology