Basic Information
Locus ID:
BH05.3525
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Mitochondrial protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 39732535 | 39736083 | + | BH05.3525 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 71,021.61 Da | 48.20 | 89.79 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 84 | 328 | 5.2E-41 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 355 | 456 | 1.1E-14 | IPR000535 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 490 | 569 | 1.0E-16 | IPR000535 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 29 | 336 | 9.16E-63 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 487 | 570 | 1.86E-19 | IPR008962 |
| SUPERFAMILY | SSF49354 | PapD-like | 350 | 470 | 3.66E-20 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 349 | 471 | 3.9E-24 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 348 | 6.2E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 133 | 2.3E-16 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 477 | 579 | 1.5E-22 | IPR013783 |
| SMART | SM00220 | serkin_6 | 42 | 328 | 6.1E-27 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 352 | 472 | 17.597425 | IPR000535 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 466 | 624 | 16.592022 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 333 | 32.795841 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 195 | 207 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 6.92E-39 |
| RefSeq | XP_039801977.1 | U-box domain-containing protein 51-like isoform X5 [Panicum virgatum] | 1.25E-178 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 6.74E-38 | |
| TrEMBL | A0A835AK62 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_057147 PE=4 SV=1 | 5.81E-202 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | BH05.3525, CH04.920, CH05.3680, Contig522.28 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_5AG0380720, gene-QOZ80_5BG0439080 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0225170.1, HORVU.MOREX.r3.7HG0748020.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_036867, gene-QYE76_036876, gene-QYE76_036884 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_06G051900, gene-BS78_08G093000 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401585 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G157900, Tel7E01G940400 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG004390, gene_TRIDC7AG075260 ... |
| Poaceae | Triticum aestivum | 20 | TraesCS3A02G073900.1, TraesCS3D02G522300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb164620_P001 |