Basic Information
Locus ID:
BH05.3486
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ADP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 38997634 | 39007064 | + | BH05.3486 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 198,719.70 Da | 49.18 | 95.17 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 1006 | 1026 | 0.93 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 240 | 523 | 1.4E-46 | IPR000719 |
| Pfam | PF00931 | NB-ARC domain | 604 | 849 | 1.2E-36 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 1000 | 1334 | 3.77E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 217 | 525 | 1.15E-65 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 1500 | 1697 | 1.18E-18 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 595 | 863 | 4.25E-49 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 585 | 752 | 4.5E-28 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1077 | 1128 | 1.1E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 334 | 533 | 8.3E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 970 | 1076 | 9.2E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 203 | 313 | 3.6E-21 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 844 | 951 | 3.3E-9 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1376 | 1558 | 8.9E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1129 | 1344 | 4.2E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1600 | 1713 | 8.5E-21 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 1084 | 1111 | 3.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 1185 | 1212 | 140.0 | IPR006553 |
| SMART | SM00220 | serkin_6 | 239 | 523 | 3.5E-25 | IPR000719 |
| SMART | SM00367 | LRR_CC_2 | 1636 | 1663 | 65.0 | IPR006553 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 239 | 526 | 36.442413 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1006 | 1027 | 7.373124 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 377 | 389 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 245 | 267 | - | IPR017441 |
| PRINTS | PR00364 | Disease resistance protein signature | 696 | 710 | 1.0E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 625 | 640 | 1.0E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1183 | 1199 | 1.0E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 796 | 810 | 1.0E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1717 | 1734 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1715 | 1760 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67520.5 | - | 1.26E-50 |
| RefSeq | XP_025823342.1 | putative disease resistance protein RGA4 isoform X1 [Panicum hallii] | 0 |
| Q7XA40 | Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 | 2.13E-50 | |
| TrEMBL | A0A2T7CU22 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G115000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology