Basic Information
Locus ID:
BH05.3372
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 36902296 | 36903693 | + | BH05.3372 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 39,041.83 Da | 47.21 | 69.30 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 295 | 324 | 8.95741E-5 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 31 | 67 | 3.1E-9 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 295 | 326 | 2.3E-7 | IPR001881 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 293 | 326 | 3.32E-8 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 244 | 331 | 4.0E-12 | - |
| SMART | SM00181 | egf_5 | 298 | 336 | 13.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 295 | 336 | 1.8E-6 | IPR001881 |
| SMART | SM00181 | egf_5 | 246 | 294 | 25.0 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 295 | 331 | 8.566949 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 295 | 319 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 310 | 321 | - | IPR000152 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 8.26E-47 |
| RefSeq | XP_025809058.1 | wall-associated receptor kinase 2-like [Panicum hallii] | 4.12E-191 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 8.15E-46 | |
| TrEMBL | A0A811QZW4 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS47669 PE=4 SV=1 | 8.37E-195 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology