Basic Information
Locus ID:
BH05.3370
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 36892957 | 36895682 | + | BH05.3370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 72,496.45 Da | 36.62 | 87.51 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 278 | 307 | 1.1634E-6 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 386 | 650 | 2.5E-47 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 15 | 71 | 5.5E-9 | IPR025287 |
| Pfam | PF07645 | Calcium-binding EGF domain | 278 | 309 | 2.3E-7 | IPR001881 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 653 | 1.35E-72 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 275 | 310 | 6.64E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 460 | 3.8E-21 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 229 | 316 | 4.7E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 461 | 655 | 1.7E-55 | - |
| SMART | SM00181 | egf_5 | 281 | 319 | 4.6 | IPR000742 |
| SMART | SM00220 | serkin_6 | 385 | 653 | 1.2E-39 | IPR000719 |
| SMART | SM00181 | egf_5 | 230 | 277 | 25.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 278 | 319 | 1.0E-6 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 653 | 38.760387 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 278 | 302 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 293 | 304 | - | IPR000152 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 391 | 415 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 505 | 517 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 5.26E-107 |
| RefSeq | XP_039801827.1 | wall-associated receptor kinase 3-like [Panicum virgatum] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 5.11E-106 | |
| TrEMBL | A0A1E5VN90 | Wall-associated receptor kinase 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0012393 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology