HalophFGD

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Basic Information
Locus ID: BH05.3149
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
BH05 31927207 31929317 + BH05.3149
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.95 47,212.57 Da 71.54 69.18 -0.55
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 348 428 - -
MobiDBLite mobidb-lite consensus disorder prediction 106 131 - -
MobiDBLite mobidb-lite consensus disorder prediction 179 211 - -
MobiDBLite mobidb-lite consensus disorder prediction 411 428 - -
MobiDBLite mobidb-lite consensus disorder prediction 194 211 - -
MobiDBLite mobidb-lite consensus disorder prediction 348 368 - -
Best hit
Source Best Hit ID Description E-value
TrEMBL A2YVY0 Programmed cell death protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29486 PE=4 SV=1 9.03E-6
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 52 AH01.1849, AH01.2108, AH01.2253, AH01.2254, AH01.2344 ...
AH01.2378, AH01.2387, AH01.2416, AH01.2564, AH01.3388, AH02.1713, AH02.2396, AH02.2605, AH02.2618, AH02.3235, AH02.411, AH03.1233, AH03.1359, AH03.1713, AH03.1714, AH03.600, AH04.1389, AH04.653, AH05.1409, AH05.2307, AH05.2563, AH05.2591, AH05.2985, AH05.3200, AH05.3322, AH06.1373, AH06.1385, AH06.1398, AH06.1490, AH06.1885, AH06.1894, AH06.2676, AH06.626, AH06.866, AH06.893, AH07.1533, AH07.1631, AH08.388, AH08.937, AH08.938, AH09.179, AH09.2447, AH09.2817, BH05.3149, CH02.1981, CH02.678, CH05.2725
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.