Basic Information
Locus ID:
BH05.2786
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 25297149 | 25300128 | - | BH05.2786 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 38,415.78 Da | 56.20 | 69.58 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 312 | 357 | 4.46807E-20 | - |
| Pfam | PF19026 | HYPK UBA domain | 318 | 357 | 1.3E-11 | IPR044034 |
| Pfam | PF01849 | NAC domain | 219 | 274 | 3.1E-21 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 225 | 278 | 4.2E-30 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 319 | 356 | 5.2E-18 | - |
| SMART | SM01407 | NAC_2 | 219 | 275 | 7.7E-26 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 216 | 281 | 17.778694 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 126 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 5.62E-74 |
| RefSeq | XP_025810146.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Panicum hallii] | 1.13E-93 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 5.4E-73 | |
| TrEMBL | A0A2T7EEK0 | NAC-A/B domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G292700 PE=4 SV=1 | 2.56E-92 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology