HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: BH05.2775
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
BH05 25160620 25166091 + BH05.2775
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
11.66 115,277.91 Da 63.47 60.02 -0.67
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 65 108 - -
MobiDBLite mobidb-lite consensus disorder prediction 1033 1058 - -
MobiDBLite mobidb-lite consensus disorder prediction 77 96 - -
MobiDBLite mobidb-lite consensus disorder prediction 805 844 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 20 - -
MobiDBLite mobidb-lite consensus disorder prediction 744 851 - -
MobiDBLite mobidb-lite consensus disorder prediction 271 290 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 24 - -
MobiDBLite mobidb-lite consensus disorder prediction 508 572 - -
MobiDBLite mobidb-lite consensus disorder prediction 1040 1058 - -
MobiDBLite mobidb-lite consensus disorder prediction 632 657 - -
MobiDBLite mobidb-lite consensus disorder prediction 185 209 - -
MobiDBLite mobidb-lite consensus disorder prediction 991 1013 - -
MobiDBLite mobidb-lite consensus disorder prediction 553 568 - -
MobiDBLite mobidb-lite consensus disorder prediction 992 1013 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021304883.1 uncharacterized protein LOC8064959 [Sorghum bicolor] 3.79E-40
TrEMBL A0A811MIS2 SWIM-type domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS4604 PE=4 SV=1 7.83E-39
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 37 AH01.187, AH01.1957, AH01.2177, AH01.3185, AH01.831 ...
AH02.1897, AH02.1960, AH02.460, AH05.1846, AH05.1852, AH07.2778, AH08.1152, AH09.346, AH09.582, BH01.2683, BH03.1603, BH03.1642, BH03.698, BH04.1205, BH05.2775, BH05.3844, BH05.891, BH05.893, BH07.1133, BH07.1134, BH07.1792, BH07.2366, BH08.2259, BH08.453, BH08.780, BH09.2496, BH09.455, BH09.614, CH02.1802, CH05.3928, CH08.1155, Contig1957.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.