Basic Information
Locus ID:
BH05.2697
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 24421196 | 24422708 | - | BH05.2697 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 43,432.15 Da | 44.45 | 82.60 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 41 | 1.2E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 41 | 6.8E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 50 | 2.4E-5 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 3.2E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 96 | 284 | 4.2E-22 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015649326.1 | F-box protein At3g07870 [Oryza sativa Japonica Group] | 3.93E-64 |
| TrEMBL | A0A368QJ25 | F-box domain-containing protein (Fragment) OS=Setaria italica OX=4555 GN=SETIT_3G256500v2 PE=4 SV=1 | 3.86E-98 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology