Basic Information
Locus ID:
BH05.2588
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 23079821 | 23082887 | - | BH05.2588 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.69 | 92,690.17 Da | 58.37 | 86.89 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 508 | 546 | 7.1E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 518 | 847 | 1.62E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 762 | 848 | 3.6E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 695 | 761 | 1.6E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 506 | 694 | 2.1E-36 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 432 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 8.62E-117 |
| RefSeq | XP_004962119.1 | LRR receptor-like serine/threonine-protein kinase ERECTA [Setaria italica] | 8.56E-194 |
| TrEMBL | K3Z6R5 | LRRNT_2 domain-containing protein OS=Setaria italica OX=4555 GN=101756593 PE=4 SV=1 | 1.94E-192 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology