Basic Information
Locus ID:
BH05.255
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 2180655 | 2183432 | - | BH05.255 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 57,425.44 Da | 58.72 | 89.36 | -0.30 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00160.1 | F-box/RNI-like/FBD-like domains-containing protein. | 1.46E-13 |
| RefSeq | XP_034602462.1 | putative F-box/FBD/LRR-repeat protein At1g78760 [Setaria viridis] | 5.12E-226 |
| Q8LF09 | F-box/FBD/LRR-repeat protein At4g00160 OS=Arabidopsis thaliana OX=3702 GN=At4g00160 PE=2 SV=2 | 1.45E-12 | |
| TrEMBL | A0A835ENI0 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_030271 PE=4 SV=1 | 2.7E-223 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_06G006580 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103696290, gene-LOC103709871 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3114.V1.1 |
| Poaceae | Echinochloa crus-galli | 12 | AH02.2967, AH02.2968, AH05.224, AH05.225, AH05.226, BH05.254 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5BG0428880, gene-QOZ80_6AG0538570 |
| Poaceae | Oryza coarctata | 2 | Oco02G019100, Oco02G019110 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g51720.1, LOC_Os01g51740.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G172600 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G022330, Chr06G024100 |
| Poaceae | Zea mays | 1 | Zm00001eb406850_P001 |
| Posidoniaceae | Posidonia oceanica | 4 | gene.Posoc04g03080, gene.Posoc04g03090, gene.Posoc04g03100 ... |