Basic Information
Locus ID:
BH05.2436
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
SnRK2.4
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 21545503 | 21549724 | + | BH05.2436 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 40,184.07 Da | 45.45 | 85.16 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 278 | 1.7E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 309 | 2.7E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 97 | 3.3E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 98 | 285 | 9.2E-63 | - |
| SMART | SM00220 | serkin_6 | 4 | 278 | 4.4E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 278 | 47.226654 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 137 | 149 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 325 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10940.1 | Protein kinase superfamily protein. Encodes a plant protein kinase similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Kinase activity of its homolog in tobacco is induced by hyperosmotic condition within 1 minute. | 1.11E-162 |
| RefSeq | XP_004961968.1 | serine/threonine-protein kinase SAPK4 [Setaria italica] | 2.58E-213 |
| Q5N942 | Serine/threonine-protein kinase SAPK4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAPK4 PE=2 SV=2 | 2.2E-186 | |
| TrEMBL | K3Z7C8 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101765115 PE=3 SV=1 | 5.84E-212 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for BH05.2436.