Basic Information
Locus ID:
BH05.2253
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 19847760 | 19852266 | - | BH05.2253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.52 | 153,848.88 Da | 45.26 | 67.18 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 247 | 333 | 3.61939E-28 | - |
| Pfam | PF00855 | PWWP domain | 247 | 334 | 6.9E-19 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 243 | 352 | 2.35E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 242 | 340 | 3.2E-24 | - |
| SMART | SM00293 | PWWP_4 | 247 | 308 | 7.8E-11 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 249 | 310 | 15.072632 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 720 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 659 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1213 | 1404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1077 | 1112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 849 | 873 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1298 | 1339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1340 | 1382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 659 | 676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1248 | 1263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1159 | 1180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 842 | 873 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1215 | 1233 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 3.12E-49 |
| RefSeq | XP_025806246.1 | uncharacterized protein LOC112884854 [Panicum hallii] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 3.06E-48 | |
| TrEMBL | A0A3L6T0V1 | PWWP domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G35370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology