Basic Information
Locus ID:
BH05.2217
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 19569352 | 19571651 | - | BH05.2217 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 65,121.68 Da | 32.28 | 91.50 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 409 | 591 | 5.94866E-89 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 50 | 211 | 1.14731E-91 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 454 | 579 | 5.5E-15 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 47 | 214 | 1.7E-34 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 244 | 360 | 1.3E-20 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 409 | 603 | 4.11E-42 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 47 | 219 | 1.18E-43 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 239 | 384 | 1.46E-30 | IPR029035 |
| Gene3D | G3DSA:3.40.50.1220 | - | 233 | 396 | 4.0E-40 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 45 | 220 | 1.3E-59 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 403 | 593 | 3.7E-57 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 42 | 603 | 9.9E-217 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_025808731.1 | pyruvate decarboxylase 1 [Panicum hallii] | 0 |
| P28516 | Pyruvate decarboxylase 1 OS=Zea mays OX=4577 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2S3HBA5 | pyruvate decarboxylase OS=Panicum hallii OX=206008 GN=PAHAL_3G244900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology