Basic Information
Locus ID:
BH05.2149
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 18939696 | 18946244 | - | BH05.2149 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 103,016.83 Da | 39.86 | 98.10 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 617 | 881 | 3.88834E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 66 | 6.0E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 291 | 326 | 1.7E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 613 | 878 | 6.3E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 596 | 891 | 6.97E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 397 | 7.94E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 378 | 1.8E-13 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 687 | 902 | 2.9E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 582 | 686 | 3.9E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 287 | 1.1E-60 | IPR032675 |
| SMART | SM00220 | serkin_6 | 611 | 883 | 1.4E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 611 | 884 | 38.831059 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 731 | 743 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 617 | 639 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 4.22E-246 |
| RefSeq | XP_025809295.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Panicum hallii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 4.07E-245 | |
| TrEMBL | A0A2S3HB33 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G238100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology