Basic Information
Locus ID:
BH05.2107
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 18448444 | 18457678 | + | BH05.2107 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 173,577.55 Da | 55.73 | 82.97 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10536 | Plant mobile domain | 527 | 887 | 3.1E-28 | IPR019557 |
| Pfam | PF00646 | F-box domain | 14 | 53 | 6.6E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 58 | 7.59E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 61 | 1.4E-6 | - |
| SMART | SM00256 | fbox_2 | 14 | 54 | 1.3E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 14 | 54 | 9.656436 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1368 | 1389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1048 | 1082 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1167 | 1194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1370 | 1387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1328 | 1347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1327 | 1347 | - | - |
| Coils | Coil | Coil | 1243 | 1270 | - | - |
| Coils | Coil | Coil | 1396 | 1416 | - | - |
| Coils | Coil | Coil | 1435 | 1455 | - | - |
| Coils | Coil | Coil | 1187 | 1235 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002466893.2 | uncharacterized protein LOC8065635 [Sorghum bicolor] | 1.17E-120 |
| TrEMBL | B8BFQ9 | PMD domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32741 PE=4 SV=1 | 9.33E-257 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||