HalophFGD

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Basic Information
Locus ID: BH05.203
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: RING-H2 zinc finger domain
Maps and Mapping Data
Chromosome Start End Strand ID
BH05 1764803 1765262 - BH05.203
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.05 14,376.19 Da 83.11 62.36 -1.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 74 106 - -
MobiDBLite mobidb-lite consensus disorder prediction 73 127 - -
KEGG Pathway
KO Term:
K22378 (E3 ubiquitin-protein ligase RNF181 [EC:2.3.2.27])
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025809875.1 E3 ubiquitin-protein ligase ATL42-like [Panicum hallii] 4.9E-10
TrEMBL A0A1E5V0D1 RING-type domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0020422 PE=4 SV=1 2.21E-17
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 AH05.173, BH05.203
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.