halophFGD

Basic Information

Locus ID: BH05.1369

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH05	12082551	12084147	+	BH05.1369

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.40	17,006.82 Da	46.40	81.13	-0.49

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	5	98	1.9E-5	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	4	101	6.83E-12	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	118	7.7E-21	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT3G25560.1	NSP-interacting kinase 2.	2.8E-39
RefSeq	XP_004963508.1	protein NSP-INTERACTING KINASE 3 [Setaria italica]	2.42E-84
Swiss-Prot	Q8RY65	Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1	2.77E-38
TrEMBL	A0A3L6REU9	Protein NSP-INTERACTING KINASE 3-like OS=Panicum miliaceum OX=4540 GN=C2845_PM06G05730 PE=3 SV=1	1.36E-85

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Anacardiaceae	Pistacia vera	1	pistato.v30110870
Arecaceae	Cocos nucifera	1	COCNU_05G006660
Plantaginaceae	Plantago ovata	1	Pov_00020346
Plumbaginaceae	Limonium bicolor	1	Lb6G31964
Poaceae	Echinochloa crus-galli	1	BH05.1369
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-17468, nbisL1-mrna-8036
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-5751
Salicaceae	Populus euphratica	1	populus_peu16677