Basic Information
Locus ID:
BH05.1181
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
vesicle-mediated transport
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 10324977 | 10328633 | - | BH05.1181 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 48,280.69 Da | 42.01 | 80.80 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 218 | 426 | 1.08E-19 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 194 | 425 | 4.8E-25 | IPR015943 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A811RS61 | WD_REPEATS_REGION domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS56750 PE=3 SV=1 | 1.96E-87 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH08.661, BH05.1181 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG003870, gene_TRIDC4BG047910 |
| Poaceae | Triticum aestivum | 2 | TraesCS4A02G028500.1, TraesCS4B02G277500.1 |