Basic Information
Locus ID:
BH04.944
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 12867475 | 12878497 | - | BH04.944 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 204,428.88 Da | 47.00 | 84.67 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 506 | 560 | 2.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 358 | 417 | 1.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 285 | 306 | 3.9E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 560 | 774 | 6.2E-40 | IPR000719 |
| Pfam | PF10536 | Plant mobile domain | 933 | 1293 | 3.0E-25 | IPR019557 |
| SUPERFAMILY | SSF52058 | L domain-like | 296 | 561 | 3.29E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 559 | 798 | 1.48E-62 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 422 | 564 | 2.0E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 565 | 638 | 1.2E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 639 | 828 | 8.2E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 421 | 4.5E-41 | IPR032675 |
| SMART | SM00220 | serkin_6 | 557 | 956 | 2.1E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 557 | 820 | 35.990124 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 382 | 404 | 7.21141 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 686 | 698 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 563 | 585 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1738 | 1753 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1712 | 1753 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1442 | 1485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1715 | 1729 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1442 | 1458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 159 | - | - |
| Coils | Coil | Coil | 1591 | 1639 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 1.36E-67 |
| RefSeq | XP_012703877.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Setaria italica] | 8.87E-144 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 1.81E-66 | |
| TrEMBL | B8BFQ9 | PMD domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32741 PE=4 SV=1 | 2.83E-254 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||