Basic Information
Locus ID:
BH04.871
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ADP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 11554112 | 11563153 | - | BH04.871 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 91,040.13 Da | 42.62 | 84.06 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 38 | 245 | 2.2E-41 | IPR000719 |
| Pfam | PF00098 | Zinc knuckle | 738 | 755 | 8.0E-5 | IPR001878 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 729 | 757 | 1.01E-5 | IPR036875 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 247 | 2.77E-60 | IPR011009 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 660 | 697 | 4.54E-5 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 671 | 766 | 1.3E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 105 | 3.4E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 123 | 269 | 4.5E-38 | - |
| SMART | SM00343 | c2hcfinal6 | 739 | 755 | 0.0049 | IPR001878 |
| SMART | SM00343 | c2hcfinal6 | 678 | 694 | 0.15 | IPR001878 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 677 | 694 | 8.531888 | IPR001878 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 323 | 31.438976 | IPR000719 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 740 | 755 | 9.735132 | IPR001878 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 65 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 441 | - | - |
| Coils | Coil | Coil | 547 | 567 | - | - |
| Coils | Coil | Coil | 576 | 607 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61370.2 | - | 1.38E-39 |
| RefSeq | XP_034606798.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g11900 isoform X2 [Setaria viridis] | 1.77E-109 |
| O64771 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabidopsis thaliana OX=3702 GN=At1g61480 PE=2 SV=2 | 1.45E-38 | |
| TrEMBL | A0A4U6TDJ5 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G091300v2 PE=4 SV=1 | 4.48E-107 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 11 | AH03.1681, BH02.1694, BH03.321, BH04.871, BH07.2625 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_3AG0221350, gene-QOZ80_3BG0267940 ... |
| Poaceae | Oryza coarctata | 4 | Oco03G007240, Oco10G013850, Oco11G010490, Oco19G003500 |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_06G044000, gene-BS78_08G060500, gene-BS78_K024200 ... |
| Poaceae | Sporobolus alterniflorus | 9 | Chr01G030640, Chr01G034250, Chr03G009660, Chr05G004500 ... |
| Poaceae | Zea mays | 1 | Zm00001eb384270_P001 |
| Poaceae | Zoysia japonica | 11 | nbis-gene-1295, nbis-gene-27399, nbis-gene-33913 ... |