HalophFGD

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Basic Information
Locus ID: BH04.791
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Histidine phosphatase superfamily (branch 1)
Maps and Mapping Data
Chromosome Start End Strand ID
BH04 10089345 10092387 - BH04.791
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.19 50,366.98 Da 65.72 69.89 -0.33
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd07040 HP 388 462 1.66559E-4 -
Pfam PF00628 PHD-finger 70 118 3.0E-10 IPR019787
SUPERFAMILY SSF53254 Phosphoglycerate mutase-like 391 466 4.71E-7 IPR029033
SUPERFAMILY SSF57903 FYVE/PHD zinc finger 64 123 1.83E-14 IPR011011
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger) 40 120 1.2E-16 IPR013083
Gene3D G3DSA:1.50.10.150 - 169 346 4.4E-13 IPR038665
SMART SM00249 PHD_3 70 117 6.2E-10 IPR001965
ProSiteProfiles PS50016 Zinc finger PHD-type profile. 68 119 9.498899 IPR019787
ProSitePatterns PS01359 Zinc finger PHD-type signature. 71 116 - IPR019786
MobiDBLite mobidb-lite consensus disorder prediction 343 359 - -
MobiDBLite mobidb-lite consensus disorder prediction 331 359 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT5G24030.2 - 4.61E-42
RefSeq XP_004960632.1 S-type anion channel SLAH2 [Setaria italica] 1.27E-46
Swiss-Prot Q9FLV9 S-type anion channel SLAH3 OS=Arabidopsis thaliana OX=3702 GN=SLAH3 PE=1 SV=1 2.14E-40
TrEMBL K3Z4I8 S-type anion channel SLAH2 OS=Setaria italica OX=4555 GN=101783196 PE=3 SV=1 2.87E-45
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg13925, jg2235, jg33951, jg7573
Aizoaceae Mesembryanthemum crystallinum 2 gene_14814, gene_16178
Amaranthaceae Atriplex hortensis 2 Ah003641, Ah018762
Amaranthaceae Beta vulgaris 2 BVRB_3g052940, BVRB_5g101630
Amaranthaceae Salicornia bigelovii 4 Sbi_jg15181, Sbi_jg4586, Sbi_jg56014, Sbi_jg7479
Amaranthaceae Salicornia europaea 2 Seu_jg12554, Seu_jg26493
Amaranthaceae Suaeda aralocaspica 2 GOSA_00001320, GOSA_00019972
Amaranthaceae Suaeda glauca 4 Sgl01482, Sgl06648, Sgl51839, Sgl57131
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000002818, gene:ENSEOMG00000007573 ...
gene:ENSEOMG00000023515, gene:ENSEOMG00000024773, gene:ENSEOMG00000032392, gene:ENSEOMG00000043037
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.3AG0003940, CQ.Regalona.r1.3BG0004110 ...
CQ.Regalona.r1.5AG0008850, CQ.Regalona.r1.5BG0009190
Anacardiaceae Pistacia vera 2 pistato.v30143280, pistato.v30202800
Apiaceae Apium graveolens 4 Ag10G02559, Ag4G02910, Ag4G02913, Ag9G02412
Arecaceae Cocos nucifera 6 COCNU_02G003300, COCNU_03G012480, COCNU_06G003390 ...
COCNU_07G007420, COCNU_14G001960, COCNU_14G001970
Arecaceae Phoenix dactylifera 7 gene-LOC103700155, gene-LOC103709012, gene-LOC103709014 ...
gene-LOC103709015, gene-LOC103710982, gene-LOC103715998, gene-LOC103718542
Asparagaceae Asparagus officinalis 3 AsparagusV1_01.1448.V1.1, AsparagusV1_05.1886.V1.1 ...
AsparagusV1_Unassigned.646.V1.1
Asteraceae Flaveria trinervia 3 Ftri13G18578, Ftri4G30928, FtriNA25147
Brassicaceae Arabidopsis thaliana 3 AT1G12480.1, AT4G27970.1, AT5G24030.1
Brassicaceae Eutrema salsugineum 3 Thhalv10003801m.g.v1.0, Thhalv10007262m.g.v1.0 ...
Thhalv10024941m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp1g11080.v2.2, Sp2g23280.v2.2, Sp7g25930.v2.2
Brassicaceae Brassica nigra 7 BniB02g076980.2N, BniB02g083250.2N, BniB03g011930.2N ...
BniB04g003350.2N, BniB04g027280.2N, BniB05g009470.2N, BniB07g040400.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq03G0520, Ceq09G1515, Ceq09G1516
Casuarinaceae Casuarina glauca 3 Cgl03G0629, Cgl09G1614, Cgl09G1615
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno12g02040, gene.Cymno12g02050, gene.Cymno16g02320
Hydrocharitaceae Thalassia testudinum 2 gene.Thate03g17240, gene.Thate09g15500
Nitrariaceae Nitraria sibirica 2 evm.TU.LG01.2814, evm.TU.LG10.1291
Plantaginaceae Plantago ovata 7 Pov_00001228, Pov_00004514, Pov_00004703, Pov_00010558 ...
Pov_00012978, Pov_00034015, Pov_00041053
Plumbaginaceae Limonium bicolor 4 Lb2G10180, Lb2G10971, Lb2G14160, Lb7G35025
Poaceae Echinochloa crus-galli 20 AH02.116, AH02.2382, AH05.1223, AH05.3232, AH05.608, BH02.98 ...
AH09.2009, BH02.2492, BH04.791, BH05.1405, BH05.3272, BH05.660, BH09.2168, CH01.2625, CH02.128, CH02.2670, CH05.1575, CH05.1577, CH05.3356, CH09.2313
Poaceae Eleusine coracana subsp. coracana 11 gene-QOZ80_1AG0001110, gene-QOZ80_1AG0025140 ...
gene-QOZ80_1BG0049550, gene-QOZ80_1BG0075690, gene-QOZ80_4AG0306710, gene-QOZ80_4BG0337710, gene-QOZ80_5AG0361630, gene-QOZ80_5AG0387460, gene-QOZ80_5AG0401360, gene-QOZ80_5BG0410030, gene-QOZ80_5BG0449950
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.1HG0032200.1, HORVU.MOREX.r3.1HG0092820.1 ...
HORVU.MOREX.r3.1HG0092840.1, HORVU.MOREX.r3.1HG0092850.1, HORVU.MOREX.r3.1HG0092860.1, HORVU.MOREX.r3.2HG0186720.1, HORVU.MOREX.r3.3HG0224010.1, HORVU.MOREX.r3.3HG0248350.1, HORVU.MOREX.r3.3HG0273350.1
Poaceae Lolium multiflorum 13 gene-QYE76_010517, gene-QYE76_015155, gene-QYE76_015156 ...
gene-QYE76_015159, gene-QYE76_015168, gene-QYE76_015172, gene-QYE76_015181, gene-QYE76_045679, gene-QYE76_051548, gene-QYE76_053881, gene-QYE76_053882, gene-QYE76_053949, gene-QYE76_053954
Poaceae Oryza coarctata 12 Oco01G005590, Oco01G010580, Oco01G014910, Oco02G005670 ...
Oco02G011320, Oco02G015230, Oco07G013700, Oco09G004780, Oco09G017940, Oco10G004000, Oco10G017830, Oco10G017840
Poaceae Oryza sativa 7 LOC_Os01g12680.1, LOC_Os01g28840.1, LOC_Os01g43460.2 ...
LOC_Os04g48530.1, LOC_Os05g13320.1, LOC_Os05g50770.2, LOC_Os07g08350.1
Poaceae Paspalum vaginatum 8 gene-BS78_03G008600, gene-BS78_03G199900, gene-BS78_K174100 ...
gene-BS78_06G053900, gene-BS78_06G194500, gene-BS78_09G087200, gene-BS78_09G251700, gene-BS78_09G251800
Poaceae Puccinellia tenuiflora 10 Pt_Chr0100847, Pt_Chr0207560, Pt_Chr0307273, Pt_Chr0307318 ...
Pt_Chr0501477, Pt_Chr0505993, Pt_Chr0505995, Pt_Chr0603442, Pt_Chr0603478, Pt_Ctg00227
Poaceae Sporobolus alterniflorus 15 Chr02G014960, Chr03G000420, Chr03G011380, Chr05G018790 ...
Chr08G005230, Chr08G011570, Chr11G007630, Chr12G025840, Chr18G004630, Chr18G016300, Chr22G000300, Chr22G012680, Chr25G005020, Chr26G013520, Chr30G004840
Poaceae Thinopyrum elongatum 13 Tel1E01G095400, Tel1E01G232100, Tel1E01G601800 ...
Tel1E01G710500, Tel1E01G711700, Tel1E01G711800, Tel1E01G711900, Tel1E01G712000, Tel1E01G712300, Tel2E01G693200, Tel3E01G049000, Tel3E01G278800, Tel3E01G385300
Poaceae Triticum dicoccoides 20 gene_TRIDC1AG018360, gene_TRIDC1AG062210 ...
gene_TRIDC1AG062340, gene_TRIDC1AG062350, gene_TRIDC1AG062380, gene_TRIDC1BG023130, gene_TRIDC1BG062130, gene_TRIDC1BG062140, gene_TRIDC1BG071360, gene_TRIDC1BG071520, gene_TRIDC1BG071530, gene_TRIDC1BG071550, gene_TRIDC2AG057610, gene_TRIDC2BG060440, gene_TRIDC3AG000170, gene_TRIDC3AG020330, gene_TRIDC3AG033690, gene_TRIDC3BG003050, gene_TRIDC3BG030640, gene_TRIDC3BG038230
Poaceae Triticum aestivum 37 TraesCS1A02G127500.1, TraesCS1A02G423000.1 ...
TraesCS1A02G423900.1, TraesCS1A02G424400.1, TraesCS1A02G424500.1, TraesCS1B02G147400.1, TraesCS1B02G388600.1, TraesCS1B02G455100.1, TraesCS1B02G456000.1, TraesCS1B02G456100.1, TraesCS1B02G456200.1, TraesCS1B02G456300.1, TraesCS1B02G456400.1, TraesCS1B02G456500.1, TraesCS1D02G126500.1, TraesCS1D02G432500.1, TraesCS1D02G432700.1, TraesCS1D02G432800.1, TraesCS1D02G432900.1, TraesCS1D02G433100.1, TraesCS1D02G433200.1, TraesCS2A02G398000.1, TraesCS2B02G416100.1, TraesCS2D02G395700.1, TraesCS3A02G028100.1, TraesCS3A02G151400.1, TraesCS3A02G225100.1, TraesCS3B02G018300.1, TraesCS3B02G178600.1, TraesCS3B02G254700.1, TraesCS3D02G017800.1, TraesCS3D02G159600.1, TraesCS3D02G228400.1, TraesCSU02G001400.1, TraesCSU02G001500.1, TraesCSU02G001600.1, TraesCSU02G204200.1.cds1
Poaceae Zea mays 9 Zm00001eb073420_P001, Zm00001eb119430_P001 ...
Zm00001eb137340_P001, Zm00001eb159490_P001, Zm00001eb284750_P001, Zm00001eb297200_P001, Zm00001eb344870_P001, Zm00001eb350550_P001, Zm00001eb358580_P004
Poaceae Zoysia japonica 7 nbis-gene-17949, nbis-gene-24296, nbis-gene-24734 ...
nbis-gene-29203, nbis-gene-32703, nbis-gene-50542, nbis-gene-5613
Poaceae Zoysia macrostachya 8 Zma_g10682, Zma_g21819, Zma_g27870, Zma_g28894, Zma_g7194 ...
Zma_g7195, Zma_g8251, Zma_g9519
Portulacaceae Portulaca oleracea 10 evm.TU.LG01.1458, evm.TU.LG01.1468, evm.TU.LG01.1470 ...
evm.TU.LG04.3476, evm.TU.LG06.1925, evm.TU.LG06.1926, evm.TU.LG14.736, evm.TU.LG14.744, evm.TU.LG14.745, evm.TU.LG16.110
Posidoniaceae Posidonia oceanica 4 gene.Posoc09g01660, gene.Posoc09g01670, gene.Posoc09g08120 ...
gene.Posoc09g08160
Rhizophoraceae Bruguiera sexangula 3 evm.TU.Scaffold_11_RagTag.1454, evm.TU.Scaffold_4_RagTag.67 ...
evm.TU.Scaffold_16_RagTag.255
Rhizophoraceae Carallia pectinifolia 3 nbisL1-mrna-22496, nbisL1-mrna-29274, nbisL1-mrna-29276
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-20545, nbisL1-mrna-3119, nbisL1-mrna-5671
Rhizophoraceae Ceriops zippeliana 4 nbisL1-mrna-20262, nbisL1-mrna-2211, nbisL1-mrna-22461 ...
nbisL1-mrna-22462
Rhizophoraceae Kandelia candel 3 evm.TU.utg000008l.38, evm.TU.utg000010l.414 ...
evm.TU.utg000022l.340
Rhizophoraceae Kandelia obovata 3 Maker00001548, Maker00008540, Maker00014425
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-1122, nbisL1-mrna-2318, nbisL1-mrna-3481
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-20535, nbisL1-mrna-6329, nbisL1-mrna-6624
Salicaceae Populus euphratica 2 populus_peu03464, populus_peu28144
Solanaceae Lycium barbarum 3 gene-LOC132631991, gene-LOC132635018, gene-LOC132639464
Solanaceae Solanum chilense 4 SOLCI002240100, SOLCI005464700, SOLCI006268000 ...
SOLCI006876500
Solanaceae Solanum pennellii 4 gene-LOC107012093, gene-LOC107022641, gene-LOC107029028 ...
gene-LOC107029865
Tamaricaceae Reaumuria soongarica 2 STRG.7757_chr04_-, gene_14118
Tamaricaceae Tamarix chinensis 2 TC01G4116, TC06G2292
Zosteraceae Zostera marina 3 Zosma01g09450.v3.1, Zosma05g00670.v3.1, Zosma05g03620.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.