Basic Information
Locus ID:
BH04.781
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 9975328 | 9976440 | + | BH04.781 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.65 | 39,570.21 Da | 41.52 | 68.65 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 18 | 50 | 2.3E-6 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 123 | 164 | 2.1E-4 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 166 | 212 | 1.7E-10 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 55 | 1.24E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 94 | 357 | 2.88E-44 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 34 | 294 | 3.7E-37 | IPR015915 |
| SMART | SM00612 | kelc_smart | 129 | 177 | 1.2E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 178 | 227 | 3.5E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 1.08E-67 |
| RefSeq | XP_025827219.1 | F-box/kelch-repeat protein At2g44130-like [Panicum hallii] | 5.42E-259 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 1.04E-66 | |
| TrEMBL | A0A1E5VAS5 | F-box/kelch-repeat protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016726 PE=4 SV=1 | 6.37E-262 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology