Basic Information
Locus ID:
BH04.679
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 7938043 | 7940672 | - | BH04.679 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.71 | 71,526.42 Da | 41.45 | 76.29 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 281 | 387 | 8.6E-16 | IPR000210 |
| Pfam | PF00161 | Ribosome inactivating protein | 16 | 211 | 8.1E-47 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 6 | 259 | 3.93E-42 | IPR036041 |
| SUPERFAMILY | SSF54695 | POZ domain | 278 | 387 | 2.46E-16 | IPR011333 |
| Gene3D | G3DSA:4.10.470.10 | Ricin (A Subunit), domain 2 | 180 | 273 | 3.4E-21 | IPR016139 |
| Gene3D | G3DSA:1.25.40.420 | - | 392 | 468 | 4.1E-16 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 274 | 391 | 4.3E-18 | IPR011333 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 1 | 179 | 1.3E-52 | IPR016138 |
| SMART | SM00225 | BTB_4 | 283 | 390 | 1.1E-13 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 283 | 343 | 14.025441 | IPR000210 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 168 | 188 | 5.2E-5 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 66 | 81 | 5.2E-5 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 17 | 30 | 5.2E-5 | IPR017989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 493 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 2.16E-24 |
| RefSeq | XP_034569492.1 | protein synthesis inhibitor II-like [Setaria viridis] | 1.62E-204 |
| P04399 | Protein synthesis inhibitor II OS=Hordeum vulgare OX=4513 GN=RIP30A PE=1 SV=1 | 1.91E-61 | |
| TrEMBL | A0A4U6TJN1 | rRNA N-glycosidase OS=Setaria viridis OX=4556 GN=SEVIR_8G160500v2 PE=3 SV=1 | 3.67E-203 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology