Basic Information
Locus ID:
BH04.534
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 5871996 | 5877710 | - | BH04.534 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 79,527.20 Da | 44.27 | 92.37 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 560 | 693 | 5.1E-16 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 492 | 559 | 8.3E-8 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 47 | 326 | 8.0E-52 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 480 | 694 | 2.91E-40 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 36 | 337 | 1.91E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 560 | 698 | 2.0E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 349 | 1.5E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 117 | 1.9E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 462 | 559 | 1.9E-19 | - |
| SMART | SM00220 | serkin_6 | 491 | 696 | 1.2E-9 | IPR000719 |
| SMART | SM00220 | serkin_6 | 46 | 326 | 3.6E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 46 | 331 | 38.124359 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 386 | 698 | 12.188468 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 52 | 75 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 497 | 520 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 180 | 192 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 9.86E-58 |
| RefSeq | NP_001141681.2 | putative protein kinase superfamily protein [Zea mays] | 1.58E-146 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 9.55E-57 | |
| TrEMBL | A0A8T0P7S1 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8NG068903 PE=3 SV=1 | 3.15E-145 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH04.534 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_9AG0670760, gene-QOZ80_9AG0675630 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.5HG0495000.1, HORVU.MOREX.r3.5HG0495010.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_026497, gene-QYE76_036873, gene-QYE76_036877 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G077900, gene-BS78_05G087600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0401770, Pt_Chr0505685 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr31G007950 |
| Poaceae | Thinopyrum elongatum | 4 | Tel5E01G468300, Tel6E01G025100, Tel7E01G888400 ... |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC5BG047840, gene_TRIDC5BG047850 ... |
| Poaceae | Triticum aestivum | 10 | TraesCS3A02G094800.1, TraesCS3D02G095000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb201450_P002 |