Basic Information
Locus ID:
BH04.471
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
beta-N-acetylhexosaminidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 5087739 | 5088688 | - | BH04.471 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 31,645.04 Da | 32.96 | 59.30 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 28 | 66 | 1.62857E-19 | - |
| CDD | cd00325 | chitinase_GH19 | 76 | 293 | 1.16517E-98 | - |
| Pfam | PF00182 | Chitinase class I | 75 | 293 | 1.1E-104 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 29 | 66 | 7.7E-13 | IPR001002 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 71 | 299 | 3.66E-91 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 29 | 68 | 1.26E-11 | IPR036861 |
| Gene3D | G3DSA:3.30.60.10 | - | 27 | 70 | 3.9E-16 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 159 | 218 | 6.7E-99 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 80 | 299 | 6.7E-99 | - |
| SMART | SM00270 | ChitinBD_3 | 29 | 66 | 5.3E-16 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 299 | 7.9E-112 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 27 | 68 | 11.015115 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 222 | 232 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 39 | 58 | - | IPR018371 |
| PRINTS | PR00451 | Chitin-binding domain signature | 45 | 52 | 7.4E-7 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 37 | 45 | 7.4E-7 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 52 | 59 | 7.4E-7 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 2.8E-136 |
| RefSeq | XP_025811819.1 | chitinase 1-like [Panicum hallii] | 9.48E-164 |
| Q42993 | Chitinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht1 PE=2 SV=1 | 3.89E-158 | |
| TrEMBL | Q6JBN6 | chitinase OS=Zea mays subsp. parviglumis OX=76912 GN=chiI PE=4 SV=1 | 7.96E-167 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology