halophFGD

Basic Information

Locus ID: BH04.2245

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH04	35715802	35718735	-	BH04.2245

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
11.02	54,694.70 Da	69.98	81.10	-0.32

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	357	418	2.8E-8	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	357	489	6.24E-19	IPR011009
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	5	58	2.49E-8	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	71	4.8E-9	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	351	508	6.1E-29	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	497	8.48536	IPR000719
MobiDBLite	mobidb-lite	consensus disorder prediction	174	203	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	281	300	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	321	347	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT3G47110.1	Leucine-rich repeat protein kinase family protein.	1.3E-19
RefSeq	XP_034568802.1	probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Setaria viridis]	9.77E-64
Swiss-Prot	Q9SD62	Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1	1.29E-18
TrEMBL	A0A5J9UI31	Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_25756 PE=4 SV=1	3.52E-61

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	6	AH05.3193, AH07.273, BH02.3460, BH02.3507, BH04.2245 ... CH08.1495