Basic Information
Locus ID:
BH04.2218
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 35364752 | 35366577 | + | BH04.2218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 26,640.06 Da | 52.64 | 90.59 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 35 | 218 | 3.4E-23 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 36 | 220 | 6.47E-45 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 10 | 233 | 5.2E-53 | - |
| SMART | SM00220 | serkin_6 | 4 | 227 | 1.3E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 220 | 23.382595 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 65 | 77 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04540.4 | - | 1.47E-44 |
| RefSeq | XP_025826833.1 | putative cysteine-rich receptor-like protein kinase 39 [Panicum hallii] | 1.75E-123 |
| Q9SYS7 | Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana OX=3702 GN=CRK39 PE=3 SV=1 | 1.87E-43 | |
| TrEMBL | A0A2T8IA68 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_8G253700 PE=3 SV=1 | 1.49E-121 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.2134, BH04.2218, CH04.2559 |
| Poaceae | Oryza coarctata | 3 | Oco21G009490, Oco21G009540, Oco22G010880 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g44660.1, LOC_Os11g44690.1 |