Basic Information
Locus ID:
BH04.2209
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 35198974 | 35205539 | - | BH04.2209 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 93,214.21 Da | 64.10 | 82.72 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 503 | 700 | 1.0E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 479 | 772 | 3.64E-58 | IPR011009 |
| Gene3D | G3DSA:1.20.930.20 | - | 323 | 442 | 9.9E-21 | IPR036537 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 464 | 582 | 4.9E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 583 | 783 | 2.3E-44 | - |
| SMART | SM00220 | serkin_6 | 503 | 771 | 3.8E-16 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 28 | 7.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 503 | 777 | 29.375412 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 625 | 637 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 827 | 849 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 188 | - | - |
| Coils | Coil | Coil | 386 | 406 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21400.2 | - | 1.83E-50 |
| RefSeq | XP_021316549.1 | putative receptor-like protein kinase At4g00960 isoform X2 [Sorghum bicolor] | 1.75E-210 |
| O65405 | Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana OX=3702 GN=CRK28 PE=3 SV=2 | 2.1E-49 | |
| TrEMBL | A0A1Z5RKQ7 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3005G207000 PE=4 SV=1 | 3.95E-209 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH04.2149, AH04.2150, AH06.444, BH04.2209, CH09.212 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_5AG0390620, gene-QOZ80_8AG0629730 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0315350.1, HORVU.MOREX.r3.3HG0315360.1 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os12g14480.1, LOC_Os12g14610.1, LOC_Os12g14699.1 |
| Poaceae | Paspalum vaginatum | 16 | gene-BS78_05G233500, gene-BS78_05G233900, gene-BS78_K259300 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0205570, Pt_Chr0205659 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G005670 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G066400 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG074570 |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G036700.1, TraesCS1D02G030000.2 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g25837, Zma_g25838 |