Basic Information
Locus ID:
BH04.2176
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 34870900 | 34878032 | - | BH04.2176 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 102,880.02 Da | 53.24 | 82.91 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 208 | 434 | 1.9E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 185 | 502 | 3.28E-50 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 848 | 932 | 2.89E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 843 | 933 | 3.5E-9 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 191 | 273 | 1.4E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 292 | 523 | 7.9E-41 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 1 | 142 | 1.0E-12 | IPR036537 |
| SMART | SM00220 | serkin_6 | 200 | 483 | 4.3E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 197 | 531 | 30.562668 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 332 | 344 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 618 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 584 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 618 | 665 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61480.1 | S-locus lectin protein kinase family protein. | 2.55E-30 |
| RefSeq | XP_034569303.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Setaria viridis] | 5.79E-154 |
| O64771 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabidopsis thaliana OX=3702 GN=At1g61480 PE=2 SV=2 | 2.53E-29 | |
| TrEMBL | A0A4U6TKA6 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G228300v2 PE=4 SV=1 | 1.31E-152 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||