Basic Information
Locus ID:
BH04.2148
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 34486703 | 34501952 | - | BH04.2148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.16 | 88,994.27 Da | 53.24 | 94.77 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 695 | 828 | 2.1E-24 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 3.3E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 324 | 6.38E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 694 | 818 | 9.84E-36 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 156 | 221 | 1.4E-11 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 683 | 841 | 1.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 223 | 369 | 8.9E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 155 | 1.1E-12 | IPR032675 |
| SMART | SM00220 | serkin_6 | 663 | 842 | 8.9E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 586 | 843 | 21.389702 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 735 | 747 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 6.72E-42 |
| RefSeq | XP_025791245.1 | probable inactive leucine-rich repeat receptor kinase XIAO [Panicum hallii] | 9.97E-153 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 1.12E-32 | |
| TrEMBL | A0A2T7CQV6 | LRRNT_2 domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_8G241400 PE=4 SV=1 | 7.15E-153 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology