halophFGD

Basic Information

Locus ID: BH04.2089

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: oxidoreductase czcO-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH04	33853657	33862667	+	BH04.2089

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.66	170,978.91 Da	39.78	89.34	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13041	PPR repeat family	1034	1083	9.4E-8	IPR002885
Pfam	PF13041	PPR repeat family	1315	1358	2.3E-8	IPR002885
Pfam	PF13041	PPR repeat family	1244	1292	1.2E-14	IPR002885
Pfam	PF01535	PPR repeat	790	818	0.18	IPR002885
Pfam	PF13041	PPR repeat family	968	1013	1.3E-12	IPR002885
Pfam	PF13738	Pyridine nucleotide-disulphide oxidoreductase	8	205	1.5E-21	-
Pfam	PF12854	PPR repeat	1170	1200	8.0E-8	IPR002885
Pfam	PF01535	PPR repeat	1388	1417	0.0053	IPR002885
Pfam	PF12854	PPR repeat	1206	1236	5.0E-6	IPR002885
Pfam	PF12854	PPR repeat	854	885	1.2E-7	IPR002885
Pfam	PF13041	PPR repeat family	1104	1153	1.1E-14	IPR002885
Pfam	PF13041	PPR repeat family	894	943	6.8E-18	IPR002885
SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	7	206	4.97E-40	IPR036188
SUPERFAMILY	SSF81901	HCP-like	904	1317	5.23E-6	-
SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	170	330	1.77E-8	IPR036188
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	716	886	8.9E-23	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	1168	1238	4.8E-16	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	1098	1167	1.8E-19	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	1239	1306	1.7E-21	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	1379	1452	7.1E-7	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	887	956	5.9E-25	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	1307	1378	2.2E-15	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	957	1097	2.3E-44	IPR011990
Gene3D	G3DSA:3.50.50.60	-	1	360	3.0E-62	IPR036188
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1282	1315	2.9E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1073	1106	6.9E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	897	930	1.1E-10	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	968	1001	2.6E-9	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1352	1386	1.2E-5	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	824	859	1.2E-6	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1317	1350	1.2E-6	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	932	966	3.5E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1003	1036	1.7E-7	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1037	1070	8.0E-6	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1388	1420	2.6E-5	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	789	819	7.5E-4	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1143	1176	5.2E-5	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1179	1209	1.0E-4	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1247	1280	4.5E-11	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1107	1141	5.9E-8	IPR002885
TIGRFAM	TIGR00756	PPR: pentatricopeptide repeat domain	1213	1246	8.9E-9	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1350	1384	10.490022	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	858	892	9.580234	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1385	1419	10.742131	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	895	929	13.690722	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1000	1034	12.24383	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1105	1139	12.813817	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1210	1244	11.334042	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1035	1069	10.248873	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	965	999	13.690722	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	822	857	10.632519	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1140	1174	11.180584	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	787	821	9.021208	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1245	1279	14.852619	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	930	964	12.539784	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1070	1104	12.627475	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1280	1314	9.985802	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1175	1209	10.709248	IPR002885
ProSiteProfiles	PS51375	Pentatricopeptide (PPR) repeat profile.	1315	1349	10.150222	IPR002885
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	170	194	3.1E-8	-
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	174	192	7.8E-7	-
PRINTS	PR00469	Pyridine nucleotide disulphide reductase class-II signature	6	28	3.1E-8	-
PRINTS	PR00368	FAD-dependent pyridine nucleotide reductase signature	7	26	7.8E-7	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K11816 (indole-3-pyruvate monooxygenase [EC:1.14.13.168])

Pathway:

ko00380 (Tryptophan metabolism) map00380 (Tryptophan metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Reaction:

R10181 (Indolepyruvate + NADPH + H+ + Oxygen <=> Indole-3-acetate + NADP+ + H2O + CO2)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G48910.1	Flavin-containing monooxygenase family protein.	1.93E-100
RefSeq	XP_004980792.1	probable indole-3-pyruvate monooxygenase YUCCA10 [Setaria italica]	2.78E-180
Swiss-Prot	Q9FVQ0	Probable indole-3-pyruvate monooxygenase YUCCA10 OS=Arabidopsis thaliana OX=3702 GN=YUC10 PE=2 SV=1	1.86E-99
TrEMBL	A0A3L6Q0Z2	Flavin-containing monooxygenase OS=Panicum miliaceum OX=4540 GN=C2845_PM17G13820 PE=3 SV=1	5.26E-182

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.4AG0007790
Arecaceae	Cocos nucifera	1	scaffold010752G000010
Asparagaceae	Asparagus officinalis	1	AsparagusV1_09.1150.V1.1
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g00170, gene.Cymno02g02240, gene.Cymno03g06300 ... gene.Cymno15g00330
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate02g06920, gene.Thate08g09850, gene.Thate08g14280 ... gene.Thate08g21140, gene.Thate09g04990
Poaceae	Echinochloa crus-galli	20	AH01.1459, AH01.1700, AH04.2051, AH06.2011, BH01.1832 ... BH01.1871, BH01.1904, BH01.1913, BH01.1959, BH04.2089, CH01.1979, CH01.1980, CH01.2004, CH01.2019, CH01.2133, CH01.2164, CH03.2508, CH04.2418, CH04.280, Contig3341.1
Poaceae	Eleusine coracana subsp. coracana	20	gene-QOZ80_2AG0112480, gene-QOZ80_2AG0112540 ... gene-QOZ80_2AG0112570, gene-QOZ80_2AG0112590, gene-QOZ80_2AG0113350, gene-QOZ80_2AG0113380, gene-QOZ80_2BG0165660, gene-QOZ80_2BG0165840, gene-QOZ80_2BG0165960, gene-QOZ80_2BG0165970, gene-QOZ80_2BG0166300, gene-QOZ80_2BG0166610, gene-QOZ80_2BG0171980, gene-QOZ80_4AG0321840, gene-QOZ80_4AG0321850, gene-QOZ80_4BG0357420, gene-QOZ80_5AG0366520, gene-QOZ80_5BG0414280, gene-QOZ80_7BG0607290, gene-QOZ80_9BG0713290
Poaceae	Hordeum vulgare	21	HORVU.MOREX.r3.1HG0005110.1.CDS1 ... HORVU.MOREX.r3.1HG0011250.1.CDS1, HORVU.MOREX.r3.1HG0011400.1.CDS1, HORVU.MOREX.r3.1HG0011450.1.CDS1, HORVU.MOREX.r3.1HG0011510.1.CDS1, HORVU.MOREX.r3.1HG0011560.1.CDS1, HORVU.MOREX.r3.1HG0011590.1.CDS1, HORVU.MOREX.r3.1HG0011680.1.CDS1, HORVU.MOREX.r3.1HG0011730.1.CDS1, HORVU.MOREX.r3.1HG0011760.1.CDS1, HORVU.MOREX.r3.1HG0011790.1.CDS1, HORVU.MOREX.r3.1HG0014490.1.CDS1, HORVU.MOREX.r3.1HG0014640.1.CDS1, HORVU.MOREX.r3.1HG0014650.1.CDS1, HORVU.MOREX.r3.1HG0014660.1.CDS1, HORVU.MOREX.r3.1HG0016620.1.CDS1, HORVU.MOREX.r3.6HG0541240.1, HORVU.MOREX.r3.6HG0551520.1.CDS1, HORVU.MOREX.r3.6HG0555030.1.CDS1, HORVU.MOREX.r3.6HG0555060.1.CDS1, HORVU.MOREX.r3.6HG0616090.1.CDS1
Poaceae	Lolium multiflorum	45	gene-QYE76_007092, gene-QYE76_007147, gene-QYE76_007305 ... gene-QYE76_007310, gene-QYE76_007810, gene-QYE76_008963, gene-QYE76_008968, gene-QYE76_008973, gene-QYE76_008975, gene-QYE76_008976, gene-QYE76_008987, gene-QYE76_009002, gene-QYE76_009034, gene-QYE76_009092, gene-QYE76_009093, gene-QYE76_009095, gene-QYE76_009097, gene-QYE76_009104, gene-QYE76_009109, gene-QYE76_009113, gene-QYE76_009326, gene-QYE76_009336, gene-QYE76_009348, gene-QYE76_009351, gene-QYE76_014117, gene-QYE76_016763, gene-QYE76_016764, gene-QYE76_016765, gene-QYE76_017955, gene-QYE76_020091, gene-QYE76_020092, gene-QYE76_020093, gene-QYE76_020094, gene-QYE76_020095, gene-QYE76_020096, gene-QYE76_020102, gene-QYE76_020114, gene-QYE76_020337, gene-QYE76_025544, gene-QYE76_043413, gene-QYE76_053818, gene-QYE76_057962, gene-QYE76_061904, gene-QYE76_063993, gene-QYE76_063995
Poaceae	Oryza coarctata	12	Oco01G006140, Oco02G006190, Oco04G003180, Oco07G003250 ... Oco07G003300, Oco08G003580, Oco16G000440, Oco19G007000, Oco19G007200, Oco19G007340, Oco20G007160, Oco20G007250
Poaceae	Oryza sativa	14	LOC_Os04g28234.2, LOC_Os04g28300.1, LOC_Os08g01640.1 ... LOC_Os08g01650.1, LOC_Os08g01870.1, LOC_Os08g15000.1, LOC_Os10g35090.1, LOC_Os10g35230.1, LOC_Os10g35240.1, LOC_Os10g35260.1, LOC_Os10g35436.1, LOC_Os10g35440.1, LOC_Os10g35640.1, LOC_Os10g35650.1
Poaceae	Paspalum vaginatum	17	gene-BS78_01G189400, gene-BS78_05G011700 ... gene-BS78_05G029200, gene-BS78_05G034100, gene-BS78_05G034200, gene-BS78_05G037400, gene-BS78_05G045700, gene-BS78_05G045800, gene-BS78_05G046300, gene-BS78_05G046500, gene-BS78_05G046600, gene-BS78_05G046900, gene-BS78_05G047400, gene-BS78_05G184700, gene-BS78_05G185100, gene-BS78_05G185600, gene-BS78_06G061400
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0500284, Pt_Chr0500285
Poaceae	Sporobolus alterniflorus	22	Chr06G030060, Chr09G000530, Chr09G000870, Chr09G001200 ... Chr09G001810, Chr0G029500, Chr13G022300, Chr18G000360, Chr22G014480, Chr23G016880, Chr24G001020, Chr24G001150, Chr24G001180, Chr24G015790, Chr25G013150, Chr25G013160, Chr25G013190, Chr25G013350, Chr28G001210, Chr30G012910, Chr30G012960, Chr30G013230
Poaceae	Thinopyrum elongatum	20	Tel1E01G069500, Tel1E01G115200, Tel1E01G115500 ... Tel1E01G115600, Tel1E01G116200, Tel1E01G118600, Tel1E01G119100, Tel1E01G119500, Tel1E01G136600, Tel1E01G136800, Tel1E01G138200, Tel1E01G138700, Tel1E01G139300, Tel1E01G139400, Tel1E01G139700, Tel1E01G152600, Tel2E01G903700, Tel2E01G904000, Tel6E01G188300, Tel6E01G556900
Poaceae	Triticum dicoccoides	49	gene_TRIDC1AG003330, gene_TRIDC1AG003340 ... gene_TRIDC1AG007580, gene_TRIDC1AG007610, gene_TRIDC1AG007780, gene_TRIDC1AG009300, gene_TRIDC1AG010140, gene_TRIDC1AG010250, gene_TRIDC1AG010270, gene_TRIDC1BG004200, gene_TRIDC1BG004230, gene_TRIDC1BG009450, gene_TRIDC1BG009460, gene_TRIDC1BG009470, gene_TRIDC1BG009590, gene_TRIDC1BG009630, gene_TRIDC1BG009650, gene_TRIDC1BG009670, gene_TRIDC1BG009890, gene_TRIDC1BG011380, gene_TRIDC1BG011500, gene_TRIDC1BG011510, gene_TRIDC1BG013060, gene_TRIDC1BG051260, gene_TRIDC2AG073710, gene_TRIDC2AG074240, gene_TRIDC2AG074270, gene_TRIDC2AG074350, gene_TRIDC2BG016010, gene_TRIDC2BG080930, gene_TRIDC2BG080970, gene_TRIDC2BG081010, gene_TRIDC5BG041750, gene_TRIDC6AG001570, gene_TRIDC6AG001580, gene_TRIDC6AG010130, gene_TRIDC6AG012860, gene_TRIDC6AG012880, gene_TRIDC6AG012890, gene_TRIDC6AG013070, gene_TRIDC6AG046880, gene_TRIDC6BG002190, gene_TRIDC6BG002200, gene_TRIDC6BG002210, gene_TRIDC6BG005590, gene_TRIDC6BG017940, gene_TRIDC6BG018300, gene_TRIDC6BG018310, gene_TRIDC6BG054690
Poaceae	Triticum aestivum	126	TraesCS1A02G031600.1.cds1, TraesCS1A02G031700.1.cds1 ... TraesCS1A02G054500.1, TraesCS1A02G054700.1.cds1, TraesCS1A02G054800.1.cds1, TraesCS1A02G055500.1.cds1, TraesCS1A02G055800.1, TraesCS1A02G056000.1.cds1, TraesCS1A02G056105.1, TraesCS1A02G057300.1, TraesCS1A02G057400.1, TraesCS1A02G066600.1.cds1, TraesCS1A02G067400.1.cds1, TraesCS1A02G067600.1.cds1, TraesCS1A02G067700.1.cds1, TraesCS1A02G072982.1.cds1, TraesCS1A02G073600.1.cds1, TraesCS1A02G073800.1.cds1, TraesCS1B02G038200.1.cds1, TraesCS1B02G038300.1.cds1, TraesCS1B02G038400.1.cds1, TraesCS1B02G038500.1.cds1, TraesCS1B02G039100.1.cds1, TraesCS1B02G039200.1.cds1, TraesCS1B02G039620.1, TraesCS1B02G039700.1.cds1, TraesCS1B02G071600.1, TraesCS1B02G071617.1.cds1, TraesCS1B02G071642.1, TraesCS1B02G072300.1.cds1, TraesCS1B02G072400.1.cds1, TraesCS1B02G072700.1.cds1, TraesCS1B02G072900.1.cds1, TraesCS1B02G074600.1.cds1, TraesCS1B02G075000.1.cds1, TraesCS1B02G084563.1.cds1, TraesCS1B02G085900.1.cds1, TraesCS1B02G086000.1, TraesCS1B02G092500.1.cds1, TraesCS1B02G092600.1.cds1, TraesCS1B02G315437.1.cds1, TraesCS1B02G315500.1.cds1, TraesCS1D02G032300.1.cds1, TraesCS1D02G033000.1.cds1, TraesCS1D02G033100.1.cds1, TraesCS1D02G033205.1.cds1, TraesCS1D02G055300.1.cds1, TraesCS1D02G055500.1, TraesCS1D02G056200.1.cds1, TraesCS1D02G056400.1.cds1, TraesCS1D02G056600.1, TraesCS1D02G057800.1.cds1, TraesCS1D02G058000.1.cds1, TraesCS1D02G058200.1.cds1, TraesCS1D02G058517.1.cds1, TraesCS1D02G067980.1, TraesCS1D02G068400.1.cds1, TraesCS1D02G068500.1.cds1, TraesCS1D02G068600.1.cds1, TraesCS1D02G068800.1.cds1, TraesCS1D02G068900.1.cds1, TraesCS1D02G069100.1, TraesCS1D02G075800.1.cds1, TraesCS1D02G076500.1.cds1, TraesCS1D02G076800.1.cds1, TraesCS1D02G076900.1, TraesCS1D02G095200.1, TraesCS2A02G478045.1.cds1, TraesCS2A02G526200.1.cds1, TraesCS2A02G530300.1, TraesCS2A02G530600.1.cds1, TraesCS2A02G530700.1.cds1, TraesCS2B02G126905.1.cds1, TraesCS2B02G560000.1.cds1, TraesCS2B02G560700.1.cds1, TraesCS2B02G560741.1.cds1, TraesCS2D02G477278.1.cds1, TraesCS2D02G532100.1.cds1, TraesCS2D02G532182.1.cds1, TraesCS2D02G532300.1.cds1, TraesCS2D02G532600.1.cds1, TraesCS5B02G250800.1.cds1, TraesCS6A02G014500.1.cds1, TraesCS6A02G014800.1.cds1, TraesCS6A02G015000.1.cds1, TraesCS6A02G015958.1.cds1, TraesCS6A02G099300.1.cds1, TraesCS6A02G099318.1.cds1, TraesCS6A02G099389.1.cds1, TraesCS6A02G099407.1, TraesCS6A02G101100.1.cds1, TraesCS6A02G311600.1.cds1, TraesCS6B02G021200.1.cds1, TraesCS6B02G021500.1.cds1, TraesCS6B02G021600.1.cds1, TraesCS6B02G021641.1.cds1, TraesCS6B02G045200.1.cds1, TraesCS6B02G114312.1.cds1, TraesCS6B02G127200.1.cds1, TraesCS6B02G127400.1.cds1, TraesCS6B02G127457.1.cds1, TraesCS6B02G127500.1.cds1, TraesCS6B02G127557.1.cds1, TraesCS6B02G129100.1, TraesCS6B02G129173.1.cds1, TraesCS6B02G129200.1.cds1, TraesCS6B02G341800.1.cds1, TraesCS6D02G018941.1, TraesCS6D02G047700.1.cds1, TraesCS6D02G076500.1, TraesCS6D02G083100.1.cds1, TraesCS6D02G083112.1.cds1, TraesCS6D02G083130.1.cds1, TraesCS6D02G083300.1.cds1, TraesCS6D02G083400.1.cds1, TraesCS6D02G089400.1.cds1, TraesCS6D02G089500.1, TraesCS6D02G089608.1.cds1, TraesCS6D02G290900.1.cds1, TraesCS7B02G469500.1.cds1, TraesCS7D02G231400.1.cds1, TraesCS7D02G487500.1.cds1, TraesCSU02G089563.1.cds1, TraesCSU02G089700.1.cds1, TraesCSU02G089705.1.cds1, TraesCSU02G090200.1.cds1
Poaceae	Zea mays	9	Zm00001eb065260_P001, Zm00001eb114490_P001 ... Zm00001eb114520_P001, Zm00001eb114600_P001, Zm00001eb114660_P001, Zm00001eb114690_P001, Zm00001eb301710_P001, Zm00001eb345130_P002, Zm00001eb345170_P001
Poaceae	Zoysia japonica	5	nbis-gene-34357, nbis-gene-43947, nbis-gene-49110 ... nbis-gene-7954, nbis-gene-7966
Poaceae	Zoysia macrostachya	7	Zma_g15222, Zma_g15496, Zma_g19491, Zma_g19493, Zma_g19497 ... Zma_g19498, Zma_g21114
Posidoniaceae	Posidonia oceanica	4	gene.Posoc02g30250, gene.Posoc02g34610, gene.Posoc07g00710 ... gene.Posoc07g00950
Salicaceae	Populus euphratica	1	populus_peu19919
Zosteraceae	Zostera marina	4	Zosma02g14330.v3.1, Zosma04g09020.v3.1, Zosma05g28260.v3.1 ... Zosma06g26890.v3.1