Basic Information
Locus ID:
BH04.1947
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 31965568 | 31974624 | + | BH04.1947 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 62,033.28 Da | 34.64 | 76.69 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 425 | 557 | 2.27455E-26 | IPR033734 |
| Pfam | PF00069 | Protein kinase domain | 19 | 297 | 8.0E-52 | IPR000719 |
| Pfam | PF01419 | Jacalin-like lectin domain | 436 | 556 | 3.2E-16 | IPR001229 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 299 | 2.32E-66 | IPR011009 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 412 | 556 | 2.49E-37 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 317 | 381 | 1.28E-11 | IPR036404 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 317 | 5.1E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 88 | 2.1E-23 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 412 | 557 | 1.4E-40 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 318 | 385 | 2.0E-11 | IPR036404 |
| SMART | SM00220 | serkin_6 | 18 | 300 | 1.3E-35 | IPR000719 |
| SMART | SM00915 | Jacalin_2 | 425 | 558 | 2.8E-5 | IPR001229 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 300 | 36.343475 | IPR000719 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 414 | 558 | 25.865774 | IPR001229 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 47 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 153 | 165 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 3.4E-54 |
| RefSeq | XP_015636615.1 | mannose/glucose-specific lectin isoform X1 [Oryza sativa Japonica Group] | 1.27E-259 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 3.33E-53 | |
| TrEMBL | A0A0E0P7W0 | Protein kinase domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 4.35E-256 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology