Basic Information
Locus ID:
BH04.1934
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF632)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 31839688 | 31853816 | + | BH04.1934 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 189,980.45 Da | 65.12 | 77.62 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 31 | 79 | 1.76291E-18 | - |
| CDD | cd02989 | Phd_like_TxnDC9 | 771 | 881 | 5.99999E-60 | - |
| Pfam | PF00085 | Thioredoxin | 778 | 864 | 3.2E-5 | IPR013766 |
| Pfam | PF04783 | Protein of unknown function (DUF630) | 984 | 1042 | 1.8E-20 | IPR006868 |
| Pfam | PF04782 | Protein of unknown function (DUF632) | 1270 | 1615 | 6.6E-113 | IPR006867 |
| Pfam | PF12906 | RING-variant domain | 31 | 78 | 3.5E-10 | IPR011016 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 730 | 889 | 1.75E-36 | IPR036249 |
| SUPERFAMILY | SSF57850 | RING/U-box | 27 | 83 | 3.11E-13 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 767 | 900 | 1.1E-32 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 26 | 84 | 5.0E-16 | IPR013083 |
| SMART | SM00744 | ringv_2 | 30 | 79 | 1.0E-15 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 23 | 85 | 20.253637 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1173 | 1245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1218 | 1237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1046 | 1072 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1191 | 1217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 514 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1046 | 1088 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 911 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 450 | - | - |
| Coils | Coil | Coil | 1677 | 1697 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22120.1 | RING/FYVE/PHD zinc finger superfamily protein. | 3.56E-182 |
| RefSeq | XP_004979657.1 | nitrate regulatory gene2 protein [Setaria italica] | 0 |
| Q8LCV1 | Thioredoxin domain-containing protein PLP3B OS=Arabidopsis thaliana OX=3702 GN=PLP3B PE=2 SV=1 | 2.54E-82 | |
| TrEMBL | A0A835ENT1 | Nitrate regulatory gene2 protein-like OS=Digitaria exilis OX=1010633 GN=HU200_034582 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology