Basic Information
Locus ID:
BH04.1918
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 31637002 | 31642536 | - | BH04.1918 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 56,679.68 Da | 57.61 | 75.18 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 135 | 234 | 7.22E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 310 | 355 | 4.97E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 311 | 368 | 1.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 279 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69630.1 | F-box/RNI-like superfamily protein. | 3.92E-8 |
| RefSeq | XP_034607272.1 | MEIOTIC F-BOX protein MOF-like [Setaria viridis] | 1.29E-58 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 2.62E-9 | |
| TrEMBL | A0A811Q960 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS36883 PE=4 SV=1 | 2.67E-79 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology