Basic Information
Locus ID:
BH04.1916
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 31618149 | 31629350 | - | BH04.1916 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 113,184.93 Da | 52.32 | 81.94 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 371 | 408 | 0.0011 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 23 | 74 | 1.22E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 183 | 615 | 1.57E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 367 | 427 | 1.44E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 23 | 74 | 9.8E-6 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 363 | 413 | 4.1E-5 | - |
| SMART | SM00256 | fbox_2 | 374 | 413 | 0.037 | IPR001810 |
| SMART | SM00256 | fbox_2 | 29 | 70 | 6.7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 23 | 73 | 8.649649 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 368 | 418 | 9.312009 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 990 | 1017 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78760.1 | F-box/RNI-like superfamily protein. | 1.59E-6 |
| RefSeq | XP_022685083.1 | putative F-box/FBD/LRR-repeat protein At5g56810 [Setaria italica] | 4.22E-115 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 3.56E-11 | |
| TrEMBL | A0A811Q960 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS36883 PE=4 SV=1 | 1.62E-170 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology