halophFGD

Basic Information

Locus ID: BH04.1790

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
BH04	29950852	29956176	-	BH04.1790

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.79	85,127.03 Da	51.05	80.81	-0.11

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	9	48	8.1E-5	IPR001810
SUPERFAMILY	SSF81383	F-box domain	10	109	1.64E-10	IPR036047
SUPERFAMILY	SSF81383	F-box domain	436	474	1.01E-5	IPR036047
MobiDBLite	mobidb-lite	consensus disorder prediction	385	412	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_039794986.1	uncharacterized protein LOC120660503 [Panicum virgatum]	4.46E-161
TrEMBL	A0A8T0VYQ6	F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG023200 PE=4 SV=1	1.01E-159

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	7	AH03.128, BH01.447, BH03.140, BH03.141, BH03.142, BH04.1790 ... CH08.349
Poaceae	Paspalum vaginatum	1	gene-BS78_02G015400