HalophFGD

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Basic Information
Locus ID: BH04.1700
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Belongs to the cytochrome P450 family
Maps and Mapping Data
Chromosome Start End Strand ID
BH04 28813642 28828020 + BH04.1700
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.76 249,042.48 Da 41.53 79.80 -0.38
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00303 retropepsin_like 458 552 2.75795E-11 -
CDD cd01647 RT_LTR 770 950 2.00561E-78 -
CDD cd09279 RNase_HI_like 1013 1090 5.80312E-27 -
Pfam PF14392 Zinc knuckle 1988 2033 6.7E-9 IPR025836
Pfam PF14111 Domain of unknown function (DUF4283) 1849 1985 4.7E-19 IPR025558
Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 788 950 6.0E-21 IPR000477
Pfam PF00067 Cytochrome P450 1386 1818 4.1E-50 IPR001128
Pfam PF17921 Integrase zinc binding domain 1095 1143 2.3E-7 IPR041588
Pfam PF13456 Reverse transcriptase-like 1017 1093 2.0E-11 IPR002156
SUPERFAMILY SSF56672 DNA/RNA polymerases 730 1091 3.22E-85 IPR043502
SUPERFAMILY SSF50630 Acid proteases 456 557 8.06E-8 IPR021109
SUPERFAMILY SSF53098 Ribonuclease H-like 1158 1264 3.22E-17 IPR012337
SUPERFAMILY SSF48264 Cytochrome P450 1380 1807 1.44E-78 IPR036396
Gene3D G3DSA:2.40.70.10 Acid Proteases 442 569 2.4E-15 IPR021109
Gene3D G3DSA:3.30.420.10 - 1152 1207 5.4E-9 IPR036397
Gene3D G3DSA:1.10.630.10 Cytochrome P450 1374 1834 1.3E-95 IPR036396
Gene3D G3DSA:3.30.420.10 - 1208 1299 3.0E-14 IPR036397
Gene3D G3DSA:3.10.10.10 HIV Type 1 Reverse Transcriptase, subunit A, domain 1 731 875 6.7E-60 -
Gene3D G3DSA:3.30.420.10 - 1014 1120 4.8E-17 IPR036397
Gene3D G3DSA:3.30.70.270 - 813 950 6.7E-60 IPR043128
ProSiteProfiles PS50878 Reverse transcriptase (RT) catalytic domain profile. 768 950 9.142104 IPR000477
ProSiteProfiles PS50879 RNase H domain profile. 1009 1149 9.111221 IPR002156
ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 1770 1779 - IPR017972
PRINTS PR00465 E-class P450 group IV signature 1761 1777 2.9E-20 IPR002403
PRINTS PR00465 E-class P450 group IV signature 1777 1795 2.9E-20 IPR002403
PRINTS PR00465 E-class P450 group IV signature 1735 1753 2.9E-20 IPR002403
PRINTS PR00465 E-class P450 group IV signature 1405 1428 2.9E-20 IPR002403
PRINTS PR00465 E-class P450 group IV signature 1681 1697 2.9E-20 IPR002403
PRINTS PR00465 E-class P450 group IV signature 1623 1649 2.9E-20 IPR002403
MobiDBLite mobidb-lite consensus disorder prediction 2101 2125 - -
MobiDBLite mobidb-lite consensus disorder prediction 2184 2220 - -
MobiDBLite mobidb-lite consensus disorder prediction 215 234 - -
MobiDBLite mobidb-lite consensus disorder prediction 365 395 - -
MobiDBLite mobidb-lite consensus disorder prediction 2060 2220 - -
MobiDBLite mobidb-lite consensus disorder prediction 587 633 - -
MobiDBLite mobidb-lite consensus disorder prediction 2140 2154 - -
Gene Ontology
Molecular Function:
GO:0003676 (nucleic acid binding) GO:0004497 (monooxygenase activity) GO:0004523 (RNA-DNA hybrid ribonuclease activity) GO:0005506 (iron ion binding) GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen) GO:0020037 (heme binding)
KEGG Pathway
KO Term:
K05917 (sterol 14alpha-demethylase [EC:1.14.14.154 1.14.15.36])
Pathway:
ko00100 (Steroid biosynthesis) map00100 (Steroid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)
Reaction:
R05640 (Lanosterol + 3 [Reduced NADPH---hemoprotein reductase] + 3 Oxygen <=> 4,4-Dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol + Formate + 3 [Oxidized NADPH---hemoprotein reductase] + 4 H2O) R05731 (Obtusifoliol + 3 [Reduced NADPH---hemoprotein reductase] + 3 Oxygen <=> 4alpha-Methyl-5alpha-ergosta-8,14,24(28)-trien-3beta-ol + Formate + 3 [Oxidized NADPH---hemoprotein reductase] + 4 H2O)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G11680.1 CYTOCHROME P450 51G1. putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis. 2.57E-140
RefSeq XP_039777340.1 obtusifoliol 14-alpha demethylase-like [Panicum virgatum] 3.83E-210
Swiss-Prot P93846 Obtusifoliol 14-alpha demethylase OS=Sorghum bicolor OX=4558 GN=CYP51 PE=1 SV=1 4.8E-144
TrEMBL L0P3P1 PH01B001I13.4 protein OS=Phyllostachys edulis OX=38705 GN=PH01B001I13.4 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 30 AH02.2831, AH03.661, AH04.1103, AH04.216, AH04.458, BH01.627 ...
BH03.2404, BH03.4279, BH04.1700, BH04.2314, BH07.2266, BH07.3065, BH08.1559, BH09.968, CH01.4222, CH02.2774, CH02.2789, CH03.1862, CH03.870, CH05.2682, CH05.4197, CH06.878, CH07.1301, CH07.1506, CH07.3848, CH08.557, CH09.1858, CH09.250, CH09.457, Contig522.18
Poaceae Lolium multiflorum 2 gene-QYE76_053643, gene-QYE76_056610
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.