Basic Information
Locus ID:
BH04.1679
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 28596129 | 28599832 | + | BH04.1679 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 46,521.49 Da | 42.22 | 60.31 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 233 | 316 | 2.0E-23 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 224 | - | - |
| Coils | Coil | Coil | 248 | 278 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 2.47E-39 |
| RefSeq | XP_034568386.1 | protein WVD2-like 4 isoform X1 [Setaria viridis] | 1.5E-193 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 2.41E-38 | |
| TrEMBL | A0A4U6THY0 | TPX2 domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G168400v2 PE=3 SV=1 | 3.39E-192 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology