Basic Information
Locus ID:
BH04.1234
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 20177794 | 20179206 | + | BH04.1234 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.20 | 42,215.09 Da | 67.56 | 69.61 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 163 | 371 | 5.2E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 373 | 7.02E-37 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 135 | 3.8E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 161 | 376 | 1.6E-33 | - |
| SMART | SM00220 | serkin_6 | 100 | 371 | 9.2E-15 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 100 | 371 | 22.322546 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 106 | 129 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 86 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73690.1 | cyclin-dependent kinase D1;1. cyclin dependent kinase activator CDKD;1. Nuclear localization. Involved in cell cycle regulation and cell differentiation. | 1.51E-18 |
| RefSeq | XP_039822724.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 1.05E-136 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 1.12E-45 | |
| TrEMBL | A0A8T0P7F4 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8NG253903 PE=4 SV=1 | 2.37E-135 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology