Basic Information
Locus ID:
BH04.1222
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
cyclin-dependent protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH04 | 19767051 | 19774175 | - | BH04.1222 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.18 | 78,550.20 Da | 54.49 | 74.93 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 567 | 727 | 2.9E-32 | IPR000719 |
| Pfam | PF05627 | Cleavage site for pathogenic type III effector avirulence factor Avr | 117 | 152 | 1.7E-14 | IPR008700 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 456 | 728 | 2.93E-51 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 454 | 537 | 3.8E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 560 | 732 | 4.5E-45 | - |
| SMART | SM00220 | serkin_6 | 460 | 727 | 8.8E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 460 | 727 | 30.590935 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 466 | 489 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 569 | 581 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 569 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 557 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76540.1 | cyclin-dependent kinase B2;1. Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle. Specifically binds to the cyclin CYCD4;1, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling. | 1.79E-30 |
| RefSeq | XP_034569860.1 | putative cyclin-dependent kinase F-2 [Setaria viridis] | 3.2E-104 |
| A2XUW1 | Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica OX=39946 GN=CDKG-2 PE=3 SV=1 | 1.12E-26 | |
| TrEMBL | A0A368S6U4 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G120100v2 PE=3 SV=1 | 2.08E-103 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH04.1222, CH04.1416 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0680700 |
| Poaceae | Oryza coarctata | 3 | Oco21G005600, Oco21G005660, Oco22G006710 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g29210.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G127800 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr31G004820 |
| Poaceae | Zea mays | 1 | Zm00001eb169750_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38581 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18814 |